Retrieve toxicity values from the Standartox data base http://standartox.uni-landau.de/.
stx_query( casnr = NULL, concentration_unit = NULL, concentration_type = NULL, duration = NULL, endpoint = c("XX50", "NOEX", "LOEX"), effect = NULL, exposure = NULL, chemical_role = NULL, chemical_class = NULL, taxa = NULL, ecotox_grp = NULL, trophic_lvl = NULL, habitat = NULL, region = NULL, vers = NULL, ... )
| concentration_unit | character; Limit data base query to specific concentration units (e.g. ug/l - default). |
|---|---|
| concentration_type | character; Limit data base query to specific concentration types, can be one of NULL (default), 'active ingredient', 'formulation', 'total', 'not reported', 'unionized', 'dissolved', 'labile'. See https://cfpub.epa.gov/ecotox/pdf/codeappendix.pdf p.4. |
| duration | integer vector of length two; Limit data base query to specific test durations (hours) (e.g. c(24, 48)). NULL (default). |
| endpoint | character; Choose endypoint type, must be one of 'XX50' (default), 'NOEX', 'LOEX'. |
| effect | character; Limit data base query to specific effect groups, multiple entries possible (e.g. 'Mortality', 'Intoxication', 'Growth'). See https://cfpub.epa.gov/ecotox/pdf/codeappendix.pdf p.95. NULL (default). |
| exposure | character; Choose exposure type, (e.g. aquatic, environmental, diet). NULL (default). |
| chemical_role | character; Limit data base query to specific chemical roles (e.g. insecticide), multiple entries possible. NULL (default). |
| chemical_class | character; Limit data base query to specific chemical classes (e.g. neonicotinoid), multiple entries possible. NULL (default). |
| taxa | character; Limit data base query to specific taxa, multiple entries possible. NULL (default). |
| ecotox_grp | character; Convenience grouping of organisms in ecotoxicology, must be one of NULL (default), 'invertebrate', 'fish', 'plant_land', 'macrophyte', 'algae'. |
| habitat | character; Limit data base query to specific organism habitats, can be one of NULL (default) 'marine', 'brackish', 'freshwater', 'terrestrial'. |
| region | character; Limit data base query to organisms occurring in specific regions, can be one of NULL (default) 'africa', 'america_north', 'america_south', 'asia', 'europe', 'oceania'. |
| vers | integer; Choose the version of the EPA Ecotox on which Standartox is based on. NULL (default) accesses the most recent version. |
| ... | currently not used |
| cas | character, integer; Limit data base query to specific CAS numbers, multiple entries possible (e.g. 1071-83-6, 1071836), NULL (default). |
| tropic_lvl | character; Trophic level of organism, must be one of NULL (default), 'autotroph', 'heterotroph'. |
Returns a list of three data.tables (filtered data base query results, aggregated data base query results, meta information)
# \donttest{ # might fail if API is not available stx_query('1071-83-6')#> #> #> #>#> $filtered #> cname cas inchikey endpoint effect #> 1: glyphosate 1071-83-6 XDDAORKBJWWYJS-UHFFFAOYSA-N XX50 mortality #> 2: glyphosate 1071-83-6 XDDAORKBJWWYJS-UHFFFAOYSA-N XX50 mortality #> 3: glyphosate 1071-83-6 XDDAORKBJWWYJS-UHFFFAOYSA-N XX50 mortality #> 4: glyphosate 1071-83-6 XDDAORKBJWWYJS-UHFFFAOYSA-N XX50 mortality #> 5: glyphosate 1071-83-6 XDDAORKBJWWYJS-UHFFFAOYSA-N XX50 population #> --- #> 643: glyphosate 1071-83-6 XDDAORKBJWWYJS-UHFFFAOYSA-N XX50 population #> 644: glyphosate 1071-83-6 XDDAORKBJWWYJS-UHFFFAOYSA-N XX50 population #> 645: glyphosate 1071-83-6 XDDAORKBJWWYJS-UHFFFAOYSA-N XX50 mortality #> 646: glyphosate 1071-83-6 XDDAORKBJWWYJS-UHFFFAOYSA-N XX50 mortality #> 647: glyphosate 1071-83-6 XDDAORKBJWWYJS-UHFFFAOYSA-N XX50 cell(s) #> exposure trophic_lvl ecotox_grp concentration_type concentration #> 1: aquatic heterotroph fish not reported 6.7900e+04 #> 2: aquatic heterotroph fish not reported 7.7600e+04 #> 3: aquatic heterotroph fish active ingredient 1.3400e+05 #> 4: aquatic heterotroph fish not reported 8.2400e+05 #> 5: aquatic autotroph macrophyte active ingredient 1.2400e+04 #> --- #> 643: environmental autotroph plant active ingredient 4.7086e-02 #> 644: environmental autotroph plant active ingredient 2.5457e-02 #> 645: aquatic heterotroph amphibia active ingredient 1.0600e+05 #> 646: aquatic heterotroph amphibia active ingredient 1.1500e+05 #> 647: invitro heterotroph fish active ingredient 7.3000e+05 #> concentration_unit concentration_orig concentration_unit_orig duration #> 1: ppb 67.9 ppm 96 #> 2: ppb 77.6 ppm 96 #> 3: ppb 134 ppm 96 #> 4: ppb 824 ppm 96 #> 5: ppb 12.4 ppm 336 #> --- #> 643: g/m2 470.86 ae g/ha 336 #> 644: g/m2 254.57 ae g/ha 672 #> 645: ug/l 106 AI mg/L 96 #> 646: ug/l 115 AI mg/L 96 #> 647: ug/l 730 mg/L 24 #> duration_unit outlier tax_rank tax_taxon tax_genus #> 1: h FALSE species Pimephales promelas Pimephales #> 2: h FALSE species Oncorhynchus mykiss Oncorhynchus #> 3: h FALSE species Oncorhynchus mykiss Oncorhynchus #> 4: h TRUE species Oncorhynchus mykiss Oncorhynchus #> 5: h FALSE species Lemna gibba Lemna #> --- #> 643: h FALSE species Richardia brasiliensis Richardia #> 644: h FALSE species Richardia brasiliensis Richardia #> 645: h FALSE species Boana pardalis Boana #> 646: h FALSE species Physalaemus cuvieri Physalaemus #> 647: h FALSE species Oncorhynchus mykiss Oncorhynchus #> tax_family tax_order tax_class tax_superclass #> 1: Cyprinidae Cypriniformes Actinopterygii Osteichthyes #> 2: Salmonidae Salmoniformes Actinopterygii Osteichthyes #> 3: Salmonidae Salmoniformes Actinopterygii Osteichthyes #> 4: Salmonidae Salmoniformes Actinopterygii Osteichthyes #> 5: Lemnaceae Arales Liliopsida <NA> #> --- #> 643: Rubiaceae Rubiales Magnoliopsida <NA> #> 644: Rubiaceae Rubiales Magnoliopsida <NA> #> 645: Hylidae Anura Amphibia <NA> #> 646: Leptodactylidae Anura Amphibia <NA> #> 647: Salmonidae Salmoniformes Actinopterygii Osteichthyes #> tax_subphylum_div tax_phylum_division tax_kingdom #> 1: Vertebrata Chordata Animalia #> 2: Vertebrata Chordata Animalia #> 3: Vertebrata Chordata Animalia #> 4: Vertebrata Chordata Animalia #> 5: <NA> Magnoliophyta Plantae #> --- #> 643: <NA> Magnoliophyta Plantae #> 644: <NA> Magnoliophyta Plantae #> 645: Vertebrata Chordata Animalia #> 646: Vertebrata Chordata Animalia #> 647: Vertebrata Chordata Animalia #> #> $filtered_all #> cname cas iupac_name #> 1: glyphosate 1071-83-6 n-(phosphonomethyl)glycine #> 2: glyphosate 1071-83-6 n-(phosphonomethyl)glycine #> 3: glyphosate 1071-83-6 n-(phosphonomethyl)glycine #> 4: glyphosate 1071-83-6 n-(phosphonomethyl)glycine #> 5: glyphosate 1071-83-6 n-(phosphonomethyl)glycine #> --- #> 643: glyphosate 1071-83-6 n-(phosphonomethyl)glycine #> 644: glyphosate 1071-83-6 n-(phosphonomethyl)glycine #> 645: glyphosate 1071-83-6 n-(phosphonomethyl)glycine #> 646: glyphosate 1071-83-6 n-(phosphonomethyl)glycine #> 647: glyphosate 1071-83-6 n-(phosphonomethyl)glycine #> inchikey #> 1: XDDAORKBJWWYJS-UHFFFAOYSA-N #> 2: XDDAORKBJWWYJS-UHFFFAOYSA-N #> 3: XDDAORKBJWWYJS-UHFFFAOYSA-N #> 4: XDDAORKBJWWYJS-UHFFFAOYSA-N #> 5: XDDAORKBJWWYJS-UHFFFAOYSA-N #> --- #> 643: XDDAORKBJWWYJS-UHFFFAOYSA-N #> 644: XDDAORKBJWWYJS-UHFFFAOYSA-N #> 645: XDDAORKBJWWYJS-UHFFFAOYSA-N #> 646: XDDAORKBJWWYJS-UHFFFAOYSA-N #> 647: XDDAORKBJWWYJS-UHFFFAOYSA-N #> inchi #> 1: 1S/C3H8NO5P/c5-3(6)1-4-2-10(7,8)9/h4H,1-2H2,(H,5,6)(H2,7,8,9) #> 2: 1S/C3H8NO5P/c5-3(6)1-4-2-10(7,8)9/h4H,1-2H2,(H,5,6)(H2,7,8,9) #> 3: 1S/C3H8NO5P/c5-3(6)1-4-2-10(7,8)9/h4H,1-2H2,(H,5,6)(H2,7,8,9) #> 4: 1S/C3H8NO5P/c5-3(6)1-4-2-10(7,8)9/h4H,1-2H2,(H,5,6)(H2,7,8,9) #> 5: 1S/C3H8NO5P/c5-3(6)1-4-2-10(7,8)9/h4H,1-2H2,(H,5,6)(H2,7,8,9) #> --- #> 643: 1S/C3H8NO5P/c5-3(6)1-4-2-10(7,8)9/h4H,1-2H2,(H,5,6)(H2,7,8,9) #> 644: 1S/C3H8NO5P/c5-3(6)1-4-2-10(7,8)9/h4H,1-2H2,(H,5,6)(H2,7,8,9) #> 645: 1S/C3H8NO5P/c5-3(6)1-4-2-10(7,8)9/h4H,1-2H2,(H,5,6)(H2,7,8,9) #> 646: 1S/C3H8NO5P/c5-3(6)1-4-2-10(7,8)9/h4H,1-2H2,(H,5,6)(H2,7,8,9) #> 647: 1S/C3H8NO5P/c5-3(6)1-4-2-10(7,8)9/h4H,1-2H2,(H,5,6)(H2,7,8,9) #> molecularweight result_id endpoint effect exposure trophic_lvl #> 1: 169.0731 2105550 XX50 mortality aquatic heterotroph #> 2: 169.0731 2101423 XX50 mortality aquatic heterotroph #> 3: 169.0731 2114879 XX50 mortality aquatic heterotroph #> 4: 169.0731 2115068 XX50 mortality aquatic heterotroph #> 5: 169.0731 2114885 XX50 population aquatic autotroph #> --- #> 643: 169.0731 2488599 XX50 population environmental autotroph #> 644: 169.0731 2488601 XX50 population environmental autotroph #> 645: 169.0731 2489643 XX50 mortality aquatic heterotroph #> 646: 169.0731 2489605 XX50 mortality aquatic heterotroph #> 647: 169.0731 2490767 XX50 cell(s) invitro heterotroph #> ecotox_grp concentration_type concentration concentration_unit #> 1: fish not reported 6.7900e+04 ppb #> 2: fish not reported 7.7600e+04 ppb #> 3: fish active ingredient 1.3400e+05 ppb #> 4: fish not reported 8.2400e+05 ppb #> 5: macrophyte active ingredient 1.2400e+04 ppb #> --- #> 643: plant active ingredient 4.7086e-02 g/m2 #> 644: plant active ingredient 2.5457e-02 g/m2 #> 645: amphibia active ingredient 1.0600e+05 ug/l #> 646: amphibia active ingredient 1.1500e+05 ug/l #> 647: fish active ingredient 7.3000e+05 ug/l #> concentration_orig concentration_unit_orig duration duration_unit outlier #> 1: 67.9 ppm 96 h FALSE #> 2: 77.6 ppm 96 h FALSE #> 3: 134 ppm 96 h FALSE #> 4: 824 ppm 96 h TRUE #> 5: 12.4 ppm 336 h FALSE #> --- #> 643: 470.86 ae g/ha 336 h FALSE #> 644: 254.57 ae g/ha 672 h FALSE #> 645: 106 AI mg/L 96 h FALSE #> 646: 115 AI mg/L 96 h FALSE #> 647: 730 mg/L 24 h FALSE #> species_number tax_rank tax_taxon tax_genus #> 1: 1 species Pimephales promelas Pimephales #> 2: 4 species Oncorhynchus mykiss Oncorhynchus #> 3: 4 species Oncorhynchus mykiss Oncorhynchus #> 4: 4 species Oncorhynchus mykiss Oncorhynchus #> 5: 1799 species Lemna gibba Lemna #> --- #> 643: 9364 species Richardia brasiliensis Richardia #> 644: 9364 species Richardia brasiliensis Richardia #> 645: 52888 species Boana pardalis Boana #> 646: 51910 species Physalaemus cuvieri Physalaemus #> 647: 4 species Oncorhynchus mykiss Oncorhynchus #> tax_family tax_order tax_class tax_superclass #> 1: Cyprinidae Cypriniformes Actinopterygii Osteichthyes #> 2: Salmonidae Salmoniformes Actinopterygii Osteichthyes #> 3: Salmonidae Salmoniformes Actinopterygii Osteichthyes #> 4: Salmonidae Salmoniformes Actinopterygii Osteichthyes #> 5: Lemnaceae Arales Liliopsida <NA> #> --- #> 643: Rubiaceae Rubiales Magnoliopsida <NA> #> 644: Rubiaceae Rubiales Magnoliopsida <NA> #> 645: Hylidae Anura Amphibia <NA> #> 646: Leptodactylidae Anura Amphibia <NA> #> 647: Salmonidae Salmoniformes Actinopterygii Osteichthyes #> tax_subphylum_div tax_phylum_division tax_kingdom hab_marine hab_brackish #> 1: Vertebrata Chordata Animalia NA NA #> 2: Vertebrata Chordata Animalia TRUE TRUE #> 3: Vertebrata Chordata Animalia TRUE TRUE #> 4: Vertebrata Chordata Animalia TRUE TRUE #> 5: <NA> Magnoliophyta Plantae NA NA #> --- #> 643: <NA> Magnoliophyta Plantae NA NA #> 644: <NA> Magnoliophyta Plantae NA NA #> 645: Vertebrata Chordata Animalia NA NA #> 646: Vertebrata Chordata Animalia NA NA #> 647: Vertebrata Chordata Animalia TRUE TRUE #> hab_freshwater hab_terrestrial reg_africa reg_america_north #> 1: TRUE NA NA TRUE #> 2: TRUE NA NA TRUE #> 3: TRUE NA NA TRUE #> 4: TRUE NA NA TRUE #> 5: TRUE NA NA NA #> --- #> 643: NA TRUE TRUE TRUE #> 644: NA TRUE TRUE TRUE #> 645: NA NA NA NA #> 646: NA NA NA NA #> 647: TRUE NA NA TRUE #> reg_america_south reg_asia reg_europe reg_oceania cro_endocrine_disruptor #> 1: NA NA TRUE NA TRUE #> 2: TRUE NA TRUE NA TRUE #> 3: TRUE NA TRUE NA TRUE #> 4: TRUE NA TRUE NA TRUE #> 5: TRUE NA TRUE NA TRUE #> --- #> 643: TRUE NA NA NA TRUE #> 644: TRUE NA NA NA TRUE #> 645: TRUE NA NA NA TRUE #> 646: TRUE NA NA NA TRUE #> 647: TRUE NA TRUE NA TRUE #> cro_herbicide cro_pesticide ccl_organophosphorus ref_number #> 1: TRUE TRUE TRUE 344 #> 2: TRUE TRUE TRUE 344 #> 3: TRUE TRUE TRUE 344 #> 4: TRUE TRUE TRUE 344 #> 5: TRUE TRUE TRUE 344 #> --- #> 643: TRUE TRUE TRUE 180230 #> 644: TRUE TRUE TRUE 180230 #> 645: TRUE TRUE TRUE 180342 #> 646: TRUE TRUE TRUE 180342 #> 647: TRUE TRUE TRUE 180556 #> ref_title #> 1: Pesticide Ecotoxicity Database (Formerly: Environmental Effects Database (EEDB)) #> 2: Pesticide Ecotoxicity Database (Formerly: Environmental Effects Database (EEDB)) #> 3: Pesticide Ecotoxicity Database (Formerly: Environmental Effects Database (EEDB)) #> 4: Pesticide Ecotoxicity Database (Formerly: Environmental Effects Database (EEDB)) #> 5: Pesticide Ecotoxicity Database (Formerly: Environmental Effects Database (EEDB)) #> --- #> 643: Tolerance to Glyphosate in Broadleaf Buttonweed and White-Eye Biotypes #> 644: Tolerance to Glyphosate in Broadleaf Buttonweed and White-Eye Biotypes #> 645: Lethal Toxicity of the Herbicides Acetochlor, Ametryn, Glyphosate and Metribuzin to Tropical Frog Larvae #> 646: Lethal Toxicity of the Herbicides Acetochlor, Ametryn, Glyphosate and Metribuzin to Tropical Frog Larvae #> 647: A Glyphosate-Based Herbicide Induces Sub-Lethal Effects in Early Life Stages and Liver Cell Line of Rainbow Trout, Oncorhynchus mykiss #> ref_author #> 1: U.S. Environmental Protection Agency #> 2: U.S. Environmental Protection Agency #> 3: U.S. Environmental Protection Agency #> 4: U.S. Environmental Protection Agency #> 5: U.S. Environmental Protection Agency #> --- #> 643: Diesel,F., M.M. Trezzi, M. Gallon, A.A.,Jr. Balbinot, and F.B. Pagnoncelli #> 644: Diesel,F., M.M. Trezzi, M. Gallon, A.A.,Jr. Balbinot, and F.B. Pagnoncelli #> 645: Daam,M.A., M.F. Moutinho, E.L.G. Espindola, and L. Schiesari #> 646: Daam,M.A., M.F. Moutinho, E.L.G. Espindola, and L. Schiesari #> 647: Weeks Santos,S., P. Gonzalez, B. Cormier, N. Mazzella, B. Bonnaud, S. Morin, C. Clerandeau, B. Morin, and J. Cachot #> ref_year #> 1: 1992 #> 2: 1992 #> 3: 1992 #> 4: 1992 #> 5: 1992 #> --- #> 643: 2018 #> 644: 2018 #> 645: 2019 #> 646: 2019 #> 647: 2019 #> #> $id #> cname cas inchikey #> 1: glyphosate 1071-83-6 XDDAORKBJWWYJS-UHFFFAOYSA-N #> 2: glyphosate 1071-83-6 XDDAORKBJWWYJS-UHFFFAOYSA-N #> 3: glyphosate 1071-83-6 XDDAORKBJWWYJS-UHFFFAOYSA-N #> 4: glyphosate 1071-83-6 XDDAORKBJWWYJS-UHFFFAOYSA-N #> 5: glyphosate 1071-83-6 XDDAORKBJWWYJS-UHFFFAOYSA-N #> --- #> 643: glyphosate 1071-83-6 XDDAORKBJWWYJS-UHFFFAOYSA-N #> 644: glyphosate 1071-83-6 XDDAORKBJWWYJS-UHFFFAOYSA-N #> 645: glyphosate 1071-83-6 XDDAORKBJWWYJS-UHFFFAOYSA-N #> 646: glyphosate 1071-83-6 XDDAORKBJWWYJS-UHFFFAOYSA-N #> 647: glyphosate 1071-83-6 XDDAORKBJWWYJS-UHFFFAOYSA-N #> inchi result_id #> 1: 1S/C3H8NO5P/c5-3(6)1-4-2-10(7,8)9/h4H,1-2H2,(H,5,6)(H2,7,8,9) 2105550 #> 2: 1S/C3H8NO5P/c5-3(6)1-4-2-10(7,8)9/h4H,1-2H2,(H,5,6)(H2,7,8,9) 2101423 #> 3: 1S/C3H8NO5P/c5-3(6)1-4-2-10(7,8)9/h4H,1-2H2,(H,5,6)(H2,7,8,9) 2114879 #> 4: 1S/C3H8NO5P/c5-3(6)1-4-2-10(7,8)9/h4H,1-2H2,(H,5,6)(H2,7,8,9) 2115068 #> 5: 1S/C3H8NO5P/c5-3(6)1-4-2-10(7,8)9/h4H,1-2H2,(H,5,6)(H2,7,8,9) 2114885 #> --- #> 643: 1S/C3H8NO5P/c5-3(6)1-4-2-10(7,8)9/h4H,1-2H2,(H,5,6)(H2,7,8,9) 2488599 #> 644: 1S/C3H8NO5P/c5-3(6)1-4-2-10(7,8)9/h4H,1-2H2,(H,5,6)(H2,7,8,9) 2488601 #> 645: 1S/C3H8NO5P/c5-3(6)1-4-2-10(7,8)9/h4H,1-2H2,(H,5,6)(H2,7,8,9) 2489643 #> 646: 1S/C3H8NO5P/c5-3(6)1-4-2-10(7,8)9/h4H,1-2H2,(H,5,6)(H2,7,8,9) 2489605 #> 647: 1S/C3H8NO5P/c5-3(6)1-4-2-10(7,8)9/h4H,1-2H2,(H,5,6)(H2,7,8,9) 2490767 #> species_number ref_number #> 1: 1 344 #> 2: 4 344 #> 3: 4 344 #> 4: 4 344 #> 5: 1799 344 #> --- #> 643: 9364 180230 #> 644: 9364 180230 #> 645: 52888 180342 #> 646: 51910 180342 #> 647: 4 180556 #> #> $aggregated #> cname cas min tax_min gmn gmnsd max #> 1: glyphosate 1071-83-6 0.001716283 Sorghum bicolor 629.9896 3.692264 6209704 #> tax_max n #> 1: Carassius auratus 647 #> tax_all #> 1: Abutilon theophrasti, Acartia tonsa, Agalychnis callidryas, Agaricus bisporus, Amaranthus palmeri, Americamysis bahia, Anabaena catenula, Anabaena flosaquae, Aporrectodea calignosa, Aspergillus nidulans, Astacus leptodactylus, Boana pardalis, Brachionus calyciflorus, Brassica napus, Caenorhabditis elegans, Calyptocarpus vialis, Carassius auratus, Ceriodaphnia dubia, Channa punctata, Chironomus plumosus, Chlorella pyrenoidosa, Chlorella saccharophila, Chlorella vulgaris, Chloris elata, Chlorococcum hypnosporum, Chordodes nobilii, Clarias gariepinus, Conium maculatum, Conyza canadensis, Crassostrea gigas, Crinia insignifera, Cynodon dactylon, Cynodon sp., Cyprinodon variegatus, Cyprinus carpio, Danio rerio, Daphnia magna, Daphnia spinulata, Datura stramonium, Dendrocephalus brasiliensis, Desmanthus illinoensis, Desmodesmus subspicatus, Digitaria insularis, Digitaria sanguinalis, Eisenia fetida, Encyonema gracile, Euplotes vannus, Folsomia candida, Gambusia affinis, Gambusia yucatana, Gammarus pseudolimnaeus, Glomus intraradices, Glycine max, Glyptocidaris crenularis, Gomphonema sp., Helix aspersa, Hoplobatrachus rugulosus, Hydra vulgaris, Ictalurus punctatus, Ipomoea indivisa, Ipomoea purpurea, Lactuca sativa, Lecane quadridentata, Lemna aequinoctialis, Lemna gibba, Lepomis macrochirus, Leptolyngbya boryana, Litoria moorei, Lolium perenne, Microcystis aeruginosa, Misgurnus anguillicaudatus, Myriophyllum aquaticum, Myriophyllum sibiricum, Myriophyllum spicatum, Navicula pelliculosa, Nicotiana plumbaginifolia, Nostoc commune, Oncorhynchus gorbuscha, Oncorhynchus keta, Oncorhynchus kisutch, Oncorhynchus mykiss, Oncorhynchus tshawytscha, Orconectes nais, Oreochromis niloticus, Oryza sativa, Pelophylax ridibundus, Perkinsus olseni, Phelipanche aegyptiaca, Pheretima peguana, Physalaemus albonotatus, Physalaemus cuvieri, Pimephales promelas, Plasmodium falciparum, Poecilia reticulata, Polypedates cruciger, Pomacea canaliculata, Pontoscolex corethrurus, Pseudokirchneriella subcapitata, Pueraria montana, Richardia brasiliensis, Salmo trutta, Scapholeberis kingi, Scenedesmus acutus, Scenedesmus quadricauda, Senna obtusifolia, Senna occidentalis, Sesbania herbacea, Skeletonema costatum, Sorghum arundinaceum, Sorghum bicolor, Spermacoce alata, Stictocardia tiliifolia, Synechocystis aquatilis, Tetrahymena pyriformis, Vigna unguiculata, Xenopus laevis, Zea mays #> #> $meta #> variable value #> 1 accessed 2020-06-02 10:08:48 #> 2 standartox_version 20191212 #>#> #> #> #> #>#> $filtered #> cname cas inchikey endpoint effect #> 1: glyphosate 1071-83-6 XDDAORKBJWWYJS-UHFFFAOYSA-N XX50 mortality #> 2: glyphosate 1071-83-6 XDDAORKBJWWYJS-UHFFFAOYSA-N XX50 mortality #> 3: glyphosate 1071-83-6 XDDAORKBJWWYJS-UHFFFAOYSA-N XX50 mortality #> 4: glyphosate 1071-83-6 XDDAORKBJWWYJS-UHFFFAOYSA-N XX50 mortality #> 5: glyphosate 1071-83-6 XDDAORKBJWWYJS-UHFFFAOYSA-N XX50 mortality #> --- #> 242: glyphosate 1071-83-6 XDDAORKBJWWYJS-UHFFFAOYSA-N XX50 mortality #> 243: glyphosate 1071-83-6 XDDAORKBJWWYJS-UHFFFAOYSA-N XX50 mortality #> 244: glyphosate 1071-83-6 XDDAORKBJWWYJS-UHFFFAOYSA-N XX50 mortality #> 245: glyphosate 1071-83-6 XDDAORKBJWWYJS-UHFFFAOYSA-N XX50 mortality #> 246: glyphosate 1071-83-6 XDDAORKBJWWYJS-UHFFFAOYSA-N XX50 mortality #> exposure trophic_lvl ecotox_grp concentration_type concentration #> 1: aquatic heterotroph fish not reported 67900 #> 2: aquatic heterotroph fish not reported 77600 #> 3: aquatic heterotroph fish active ingredient 134000 #> 4: aquatic heterotroph fish not reported 824000 #> 5: aquatic heterotroph fish active ingredient 240000 #> --- #> 242: aquatic heterotroph fish active ingredient 180000 #> 243: aquatic heterotroph amphibia formulation 5380 #> 244: environmental heterotroph fungi formulation 250000 #> 245: aquatic heterotroph amphibia active ingredient 106000 #> 246: aquatic heterotroph amphibia active ingredient 115000 #> concentration_unit concentration_orig concentration_unit_orig duration #> 1: ppb 67.9 ppm 96 #> 2: ppb 77.6 ppm 96 #> 3: ppb 134 ppm 96 #> 4: ppb 824 ppm 96 #> 5: ppb 240 ppm 96 #> --- #> 242: ug/l 180 mg/L 96 #> 243: ug/l 5.38 mg/L 96 #> 244: ppb 0.025 % 48 #> 245: ug/l 106 AI mg/L 96 #> 246: ug/l 115 AI mg/L 96 #> duration_unit outlier tax_rank tax_taxon tax_genus #> 1: h FALSE species Pimephales promelas Pimephales #> 2: h FALSE species Oncorhynchus mykiss Oncorhynchus #> 3: h FALSE species Oncorhynchus mykiss Oncorhynchus #> 4: h TRUE species Oncorhynchus mykiss Oncorhynchus #> 5: h FALSE species Cyprinodon variegatus Cyprinodon #> --- #> 242: h FALSE species Poecilia reticulata Poecilia #> 243: h FALSE species Physalaemus albonotatus Physalaemus #> 244: h FALSE species Aspergillus nidulans Aspergillus #> 245: h FALSE species Boana pardalis Boana #> 246: h FALSE species Physalaemus cuvieri Physalaemus #> tax_family tax_order tax_class tax_superclass #> 1: Cyprinidae Cypriniformes Actinopterygii Osteichthyes #> 2: Salmonidae Salmoniformes Actinopterygii Osteichthyes #> 3: Salmonidae Salmoniformes Actinopterygii Osteichthyes #> 4: Salmonidae Salmoniformes Actinopterygii Osteichthyes #> 5: Cyprinodontidae Cyprinodontiformes Actinopterygii Osteichthyes #> --- #> 242: Poeciliidae Cyprinodontiformes Actinopterygii Osteichthyes #> 243: Leptodactylidae Anura Amphibia <NA> #> 244: Trichocomaceae Eurotiales Eurotiomycetes <NA> #> 245: Hylidae Anura Amphibia <NA> #> 246: Leptodactylidae Anura Amphibia <NA> #> tax_subphylum_div tax_phylum_division tax_kingdom #> 1: Vertebrata Chordata Animalia #> 2: Vertebrata Chordata Animalia #> 3: Vertebrata Chordata Animalia #> 4: Vertebrata Chordata Animalia #> 5: Vertebrata Chordata Animalia #> --- #> 242: Vertebrata Chordata Animalia #> 243: Vertebrata Chordata Animalia #> 244: <NA> Ascomycota Fungi #> 245: Vertebrata Chordata Animalia #> 246: Vertebrata Chordata Animalia #> #> $filtered_all #> cname cas iupac_name #> 1: glyphosate 1071-83-6 n-(phosphonomethyl)glycine #> 2: glyphosate 1071-83-6 n-(phosphonomethyl)glycine #> 3: glyphosate 1071-83-6 n-(phosphonomethyl)glycine #> 4: glyphosate 1071-83-6 n-(phosphonomethyl)glycine #> 5: glyphosate 1071-83-6 n-(phosphonomethyl)glycine #> --- #> 242: glyphosate 1071-83-6 n-(phosphonomethyl)glycine #> 243: glyphosate 1071-83-6 n-(phosphonomethyl)glycine #> 244: glyphosate 1071-83-6 n-(phosphonomethyl)glycine #> 245: glyphosate 1071-83-6 n-(phosphonomethyl)glycine #> 246: glyphosate 1071-83-6 n-(phosphonomethyl)glycine #> inchikey #> 1: XDDAORKBJWWYJS-UHFFFAOYSA-N #> 2: XDDAORKBJWWYJS-UHFFFAOYSA-N #> 3: XDDAORKBJWWYJS-UHFFFAOYSA-N #> 4: XDDAORKBJWWYJS-UHFFFAOYSA-N #> 5: XDDAORKBJWWYJS-UHFFFAOYSA-N #> --- #> 242: XDDAORKBJWWYJS-UHFFFAOYSA-N #> 243: XDDAORKBJWWYJS-UHFFFAOYSA-N #> 244: XDDAORKBJWWYJS-UHFFFAOYSA-N #> 245: XDDAORKBJWWYJS-UHFFFAOYSA-N #> 246: XDDAORKBJWWYJS-UHFFFAOYSA-N #> inchi #> 1: 1S/C3H8NO5P/c5-3(6)1-4-2-10(7,8)9/h4H,1-2H2,(H,5,6)(H2,7,8,9) #> 2: 1S/C3H8NO5P/c5-3(6)1-4-2-10(7,8)9/h4H,1-2H2,(H,5,6)(H2,7,8,9) #> 3: 1S/C3H8NO5P/c5-3(6)1-4-2-10(7,8)9/h4H,1-2H2,(H,5,6)(H2,7,8,9) #> 4: 1S/C3H8NO5P/c5-3(6)1-4-2-10(7,8)9/h4H,1-2H2,(H,5,6)(H2,7,8,9) #> 5: 1S/C3H8NO5P/c5-3(6)1-4-2-10(7,8)9/h4H,1-2H2,(H,5,6)(H2,7,8,9) #> --- #> 242: 1S/C3H8NO5P/c5-3(6)1-4-2-10(7,8)9/h4H,1-2H2,(H,5,6)(H2,7,8,9) #> 243: 1S/C3H8NO5P/c5-3(6)1-4-2-10(7,8)9/h4H,1-2H2,(H,5,6)(H2,7,8,9) #> 244: 1S/C3H8NO5P/c5-3(6)1-4-2-10(7,8)9/h4H,1-2H2,(H,5,6)(H2,7,8,9) #> 245: 1S/C3H8NO5P/c5-3(6)1-4-2-10(7,8)9/h4H,1-2H2,(H,5,6)(H2,7,8,9) #> 246: 1S/C3H8NO5P/c5-3(6)1-4-2-10(7,8)9/h4H,1-2H2,(H,5,6)(H2,7,8,9) #> molecularweight result_id endpoint effect exposure trophic_lvl #> 1: 169.0731 2105550 XX50 mortality aquatic heterotroph #> 2: 169.0731 2101423 XX50 mortality aquatic heterotroph #> 3: 169.0731 2114879 XX50 mortality aquatic heterotroph #> 4: 169.0731 2115068 XX50 mortality aquatic heterotroph #> 5: 169.0731 2114880 XX50 mortality aquatic heterotroph #> --- #> 242: 169.0731 2470910 XX50 mortality aquatic heterotroph #> 243: 169.0731 2475114 XX50 mortality aquatic heterotroph #> 244: 169.0731 2480702 XX50 mortality environmental heterotroph #> 245: 169.0731 2489643 XX50 mortality aquatic heterotroph #> 246: 169.0731 2489605 XX50 mortality aquatic heterotroph #> ecotox_grp concentration_type concentration concentration_unit #> 1: fish not reported 67900 ppb #> 2: fish not reported 77600 ppb #> 3: fish active ingredient 134000 ppb #> 4: fish not reported 824000 ppb #> 5: fish active ingredient 240000 ppb #> --- #> 242: fish active ingredient 180000 ug/l #> 243: amphibia formulation 5380 ug/l #> 244: fungi formulation 250000 ppb #> 245: amphibia active ingredient 106000 ug/l #> 246: amphibia active ingredient 115000 ug/l #> concentration_orig concentration_unit_orig duration duration_unit outlier #> 1: 67.9 ppm 96 h FALSE #> 2: 77.6 ppm 96 h FALSE #> 3: 134 ppm 96 h FALSE #> 4: 824 ppm 96 h TRUE #> 5: 240 ppm 96 h FALSE #> --- #> 242: 180 mg/L 96 h FALSE #> 243: 5.38 mg/L 96 h FALSE #> 244: 0.025 % 48 h FALSE #> 245: 106 AI mg/L 96 h FALSE #> 246: 115 AI mg/L 96 h FALSE #> species_number tax_rank tax_taxon tax_genus #> 1: 1 species Pimephales promelas Pimephales #> 2: 4 species Oncorhynchus mykiss Oncorhynchus #> 3: 4 species Oncorhynchus mykiss Oncorhynchus #> 4: 4 species Oncorhynchus mykiss Oncorhynchus #> 5: 86 species Cyprinodon variegatus Cyprinodon #> --- #> 242: 28 species Poecilia reticulata Poecilia #> 243: 52467 species Physalaemus albonotatus Physalaemus #> 244: 17465 species Aspergillus nidulans Aspergillus #> 245: 52888 species Boana pardalis Boana #> 246: 51910 species Physalaemus cuvieri Physalaemus #> tax_family tax_order tax_class tax_superclass #> 1: Cyprinidae Cypriniformes Actinopterygii Osteichthyes #> 2: Salmonidae Salmoniformes Actinopterygii Osteichthyes #> 3: Salmonidae Salmoniformes Actinopterygii Osteichthyes #> 4: Salmonidae Salmoniformes Actinopterygii Osteichthyes #> 5: Cyprinodontidae Cyprinodontiformes Actinopterygii Osteichthyes #> --- #> 242: Poeciliidae Cyprinodontiformes Actinopterygii Osteichthyes #> 243: Leptodactylidae Anura Amphibia <NA> #> 244: Trichocomaceae Eurotiales Eurotiomycetes <NA> #> 245: Hylidae Anura Amphibia <NA> #> 246: Leptodactylidae Anura Amphibia <NA> #> tax_subphylum_div tax_phylum_division tax_kingdom hab_marine hab_brackish #> 1: Vertebrata Chordata Animalia NA NA #> 2: Vertebrata Chordata Animalia TRUE TRUE #> 3: Vertebrata Chordata Animalia TRUE TRUE #> 4: Vertebrata Chordata Animalia TRUE TRUE #> 5: Vertebrata Chordata Animalia TRUE TRUE #> --- #> 242: Vertebrata Chordata Animalia NA TRUE #> 243: Vertebrata Chordata Animalia NA NA #> 244: <NA> Ascomycota Fungi TRUE TRUE #> 245: Vertebrata Chordata Animalia NA NA #> 246: Vertebrata Chordata Animalia NA NA #> hab_freshwater hab_terrestrial reg_africa reg_america_north #> 1: TRUE NA NA TRUE #> 2: TRUE NA NA TRUE #> 3: TRUE NA NA TRUE #> 4: TRUE NA NA TRUE #> 5: TRUE NA NA TRUE #> --- #> 242: TRUE NA NA TRUE #> 243: NA NA NA NA #> 244: TRUE TRUE TRUE TRUE #> 245: NA NA NA NA #> 246: NA NA NA NA #> reg_america_south reg_asia reg_europe reg_oceania cro_endocrine_disruptor #> 1: NA NA TRUE NA TRUE #> 2: TRUE NA TRUE NA TRUE #> 3: TRUE NA TRUE NA TRUE #> 4: TRUE NA TRUE NA TRUE #> 5: NA NA NA NA TRUE #> --- #> 242: TRUE TRUE TRUE TRUE TRUE #> 243: TRUE NA NA NA TRUE #> 244: TRUE TRUE TRUE TRUE TRUE #> 245: TRUE NA NA NA TRUE #> 246: TRUE NA NA NA TRUE #> cro_herbicide cro_pesticide ccl_organophosphorus ref_number #> 1: TRUE TRUE TRUE 344 #> 2: TRUE TRUE TRUE 344 #> 3: TRUE TRUE TRUE 344 #> 4: TRUE TRUE TRUE 344 #> 5: TRUE TRUE TRUE 344 #> --- #> 242: TRUE TRUE TRUE 179273 #> 243: TRUE TRUE TRUE 179421 #> 244: TRUE TRUE TRUE 179826 #> 245: TRUE TRUE TRUE 180342 #> 246: TRUE TRUE TRUE 180342 #> ref_title #> 1: Pesticide Ecotoxicity Database (Formerly: Environmental Effects Database (EEDB)) #> 2: Pesticide Ecotoxicity Database (Formerly: Environmental Effects Database (EEDB)) #> 3: Pesticide Ecotoxicity Database (Formerly: Environmental Effects Database (EEDB)) #> 4: Pesticide Ecotoxicity Database (Formerly: Environmental Effects Database (EEDB)) #> 5: Pesticide Ecotoxicity Database (Formerly: Environmental Effects Database (EEDB)) #> --- #> 242: Gender-Specific Histopathological Response in Guppies Poecilia reticulata Exposed to Glyphosate or Its Metabolite Aminomethylphosphonic Acid #> 243: Toxicity of Glyphosate on Physalaemus albonotatus (Steindachner, 1864) from Western Brazil #> 244: Multiple Effects of a Commercial Roundup Formulation on the Soil Filamentous Fungus Aspergillus nidulans at Low Doses: Evidence of an Unexpected Impact on Energetic Metabolism #> 245: Lethal Toxicity of the Herbicides Acetochlor, Ametryn, Glyphosate and Metribuzin to Tropical Frog Larvae #> 246: Lethal Toxicity of the Herbicides Acetochlor, Ametryn, Glyphosate and Metribuzin to Tropical Frog Larvae #> ref_author #> 1: U.S. Environmental Protection Agency #> 2: U.S. Environmental Protection Agency #> 3: U.S. Environmental Protection Agency #> 4: U.S. Environmental Protection Agency #> 5: U.S. Environmental Protection Agency #> --- #> 242: Antunes,A.M., T.L. Rocha, F.S. Pires, M.A. De Freitas, V.R.M.C. Leite, S. Arana, P.C. Moreira, and S.M.T. Saboia-Morais #> 243: Simioni,F., D.F.N. Da Silva, and T. Mott #> 244: Nicolas,V., N. Oestreicher, and C. Velot #> 245: Daam,M.A., M.F. Moutinho, E.L.G. Espindola, and L. Schiesari #> 246: Daam,M.A., M.F. Moutinho, E.L.G. Espindola, and L. Schiesari #> ref_year #> 1: 1992 #> 2: 1992 #> 3: 1992 #> 4: 1992 #> 5: 1992 #> --- #> 242: 2017 #> 243: 2013 #> 244: 2016 #> 245: 2019 #> 246: 2019 #> #> $id #> cname cas inchikey #> 1: glyphosate 1071-83-6 XDDAORKBJWWYJS-UHFFFAOYSA-N #> 2: glyphosate 1071-83-6 XDDAORKBJWWYJS-UHFFFAOYSA-N #> 3: glyphosate 1071-83-6 XDDAORKBJWWYJS-UHFFFAOYSA-N #> 4: glyphosate 1071-83-6 XDDAORKBJWWYJS-UHFFFAOYSA-N #> 5: glyphosate 1071-83-6 XDDAORKBJWWYJS-UHFFFAOYSA-N #> --- #> 242: glyphosate 1071-83-6 XDDAORKBJWWYJS-UHFFFAOYSA-N #> 243: glyphosate 1071-83-6 XDDAORKBJWWYJS-UHFFFAOYSA-N #> 244: glyphosate 1071-83-6 XDDAORKBJWWYJS-UHFFFAOYSA-N #> 245: glyphosate 1071-83-6 XDDAORKBJWWYJS-UHFFFAOYSA-N #> 246: glyphosate 1071-83-6 XDDAORKBJWWYJS-UHFFFAOYSA-N #> inchi result_id #> 1: 1S/C3H8NO5P/c5-3(6)1-4-2-10(7,8)9/h4H,1-2H2,(H,5,6)(H2,7,8,9) 2105550 #> 2: 1S/C3H8NO5P/c5-3(6)1-4-2-10(7,8)9/h4H,1-2H2,(H,5,6)(H2,7,8,9) 2101423 #> 3: 1S/C3H8NO5P/c5-3(6)1-4-2-10(7,8)9/h4H,1-2H2,(H,5,6)(H2,7,8,9) 2114879 #> 4: 1S/C3H8NO5P/c5-3(6)1-4-2-10(7,8)9/h4H,1-2H2,(H,5,6)(H2,7,8,9) 2115068 #> 5: 1S/C3H8NO5P/c5-3(6)1-4-2-10(7,8)9/h4H,1-2H2,(H,5,6)(H2,7,8,9) 2114880 #> --- #> 242: 1S/C3H8NO5P/c5-3(6)1-4-2-10(7,8)9/h4H,1-2H2,(H,5,6)(H2,7,8,9) 2470910 #> 243: 1S/C3H8NO5P/c5-3(6)1-4-2-10(7,8)9/h4H,1-2H2,(H,5,6)(H2,7,8,9) 2475114 #> 244: 1S/C3H8NO5P/c5-3(6)1-4-2-10(7,8)9/h4H,1-2H2,(H,5,6)(H2,7,8,9) 2480702 #> 245: 1S/C3H8NO5P/c5-3(6)1-4-2-10(7,8)9/h4H,1-2H2,(H,5,6)(H2,7,8,9) 2489643 #> 246: 1S/C3H8NO5P/c5-3(6)1-4-2-10(7,8)9/h4H,1-2H2,(H,5,6)(H2,7,8,9) 2489605 #> species_number ref_number #> 1: 1 344 #> 2: 4 344 #> 3: 4 344 #> 4: 4 344 #> 5: 86 344 #> --- #> 242: 28 179273 #> 243: 52467 179421 #> 244: 17465 179826 #> 245: 52888 180342 #> 246: 51910 180342 #> #> $aggregated #> cname cas min tax_min gmn gmnsd max #> 1: glyphosate 1071-83-6 2.5145 Pheretima peguana 13614.71 2.399646 6209704 #> tax_max n #> 1: Carassius auratus 246 #> tax_all #> 1: Acartia tonsa, Americamysis bahia, Anabaena flosaquae, Aspergillus nidulans, Astacus leptodactylus, Boana pardalis, Carassius auratus, Ceriodaphnia dubia, Channa punctata, Chironomus plumosus, Chlorella pyrenoidosa, Chlorella saccharophila, Chlorella vulgaris, Chlorococcum hypnosporum, Chordodes nobilii, Clarias gariepinus, Crassostrea gigas, Crinia insignifera, Cyprinodon variegatus, Cyprinus carpio, Danio rerio, Daphnia magna, Daphnia spinulata, Dendrocephalus brasiliensis, Desmodesmus subspicatus, Eisenia fetida, Encyonema gracile, Euplotes vannus, Gambusia affinis, Gambusia yucatana, Gammarus pseudolimnaeus, Glyptocidaris crenularis, Gomphonema sp., Hoplobatrachus rugulosus, Hydra vulgaris, Ictalurus punctatus, Lactuca sativa, Lecane quadridentata, Lemna gibba, Lepomis macrochirus, Litoria moorei, Microcystis aeruginosa, Myriophyllum spicatum, Navicula pelliculosa, Oncorhynchus gorbuscha, Oncorhynchus keta, Oncorhynchus kisutch, Oncorhynchus mykiss, Oncorhynchus tshawytscha, Orconectes nais, Oreochromis niloticus, Pelophylax ridibundus, Perkinsus olseni, Pheretima peguana, Physalaemus albonotatus, Physalaemus cuvieri, Pimephales promelas, Plasmodium falciparum, Poecilia reticulata, Polypedates cruciger, Pomacea canaliculata, Pseudokirchneriella subcapitata, Salmo trutta, Scenedesmus acutus, Scenedesmus quadricauda, Skeletonema costatum, Xenopus laevis #> #> $meta #> variable value #> 1 accessed 2020-06-02 10:08:49 #> 2 standartox_version 20191212 #>#> #> #> #> #>#> $filtered #> cname cas inchikey endpoint effect #> 1: glyphosate 1071-83-6 XDDAORKBJWWYJS-UHFFFAOYSA-N XX50 mortality #> 2: glyphosate 1071-83-6 XDDAORKBJWWYJS-UHFFFAOYSA-N XX50 mortality #> 3: glyphosate 1071-83-6 XDDAORKBJWWYJS-UHFFFAOYSA-N XX50 mortality #> 4: glyphosate 1071-83-6 XDDAORKBJWWYJS-UHFFFAOYSA-N XX50 mortality #> 5: glyphosate 1071-83-6 XDDAORKBJWWYJS-UHFFFAOYSA-N XX50 mortality #> --- #> 242: glyphosate 1071-83-6 XDDAORKBJWWYJS-UHFFFAOYSA-N XX50 mortality #> 243: glyphosate 1071-83-6 XDDAORKBJWWYJS-UHFFFAOYSA-N XX50 mortality #> 244: glyphosate 1071-83-6 XDDAORKBJWWYJS-UHFFFAOYSA-N XX50 mortality #> 245: glyphosate 1071-83-6 XDDAORKBJWWYJS-UHFFFAOYSA-N XX50 mortality #> 246: glyphosate 1071-83-6 XDDAORKBJWWYJS-UHFFFAOYSA-N XX50 mortality #> exposure trophic_lvl ecotox_grp concentration_type concentration #> 1: aquatic heterotroph fish not reported 67900 #> 2: aquatic heterotroph fish not reported 77600 #> 3: aquatic heterotroph fish active ingredient 134000 #> 4: aquatic heterotroph fish not reported 824000 #> 5: aquatic heterotroph fish active ingredient 240000 #> --- #> 242: aquatic heterotroph fish active ingredient 180000 #> 243: aquatic heterotroph amphibia formulation 5380 #> 244: environmental heterotroph fungi formulation 250000 #> 245: aquatic heterotroph amphibia active ingredient 106000 #> 246: aquatic heterotroph amphibia active ingredient 115000 #> concentration_unit concentration_orig concentration_unit_orig duration #> 1: ppb 67.9 ppm 96 #> 2: ppb 77.6 ppm 96 #> 3: ppb 134 ppm 96 #> 4: ppb 824 ppm 96 #> 5: ppb 240 ppm 96 #> --- #> 242: ug/l 180 mg/L 96 #> 243: ug/l 5.38 mg/L 96 #> 244: ppb 0.025 % 48 #> 245: ug/l 106 AI mg/L 96 #> 246: ug/l 115 AI mg/L 96 #> duration_unit outlier tax_rank tax_taxon tax_genus #> 1: h FALSE species Pimephales promelas Pimephales #> 2: h FALSE species Oncorhynchus mykiss Oncorhynchus #> 3: h FALSE species Oncorhynchus mykiss Oncorhynchus #> 4: h TRUE species Oncorhynchus mykiss Oncorhynchus #> 5: h FALSE species Cyprinodon variegatus Cyprinodon #> --- #> 242: h FALSE species Poecilia reticulata Poecilia #> 243: h FALSE species Physalaemus albonotatus Physalaemus #> 244: h FALSE species Aspergillus nidulans Aspergillus #> 245: h FALSE species Boana pardalis Boana #> 246: h FALSE species Physalaemus cuvieri Physalaemus #> tax_family tax_order tax_class tax_superclass #> 1: Cyprinidae Cypriniformes Actinopterygii Osteichthyes #> 2: Salmonidae Salmoniformes Actinopterygii Osteichthyes #> 3: Salmonidae Salmoniformes Actinopterygii Osteichthyes #> 4: Salmonidae Salmoniformes Actinopterygii Osteichthyes #> 5: Cyprinodontidae Cyprinodontiformes Actinopterygii Osteichthyes #> --- #> 242: Poeciliidae Cyprinodontiformes Actinopterygii Osteichthyes #> 243: Leptodactylidae Anura Amphibia <NA> #> 244: Trichocomaceae Eurotiales Eurotiomycetes <NA> #> 245: Hylidae Anura Amphibia <NA> #> 246: Leptodactylidae Anura Amphibia <NA> #> tax_subphylum_div tax_phylum_division tax_kingdom #> 1: Vertebrata Chordata Animalia #> 2: Vertebrata Chordata Animalia #> 3: Vertebrata Chordata Animalia #> 4: Vertebrata Chordata Animalia #> 5: Vertebrata Chordata Animalia #> --- #> 242: Vertebrata Chordata Animalia #> 243: Vertebrata Chordata Animalia #> 244: <NA> Ascomycota Fungi #> 245: Vertebrata Chordata Animalia #> 246: Vertebrata Chordata Animalia #> #> $filtered_all #> cname cas iupac_name #> 1: glyphosate 1071-83-6 n-(phosphonomethyl)glycine #> 2: glyphosate 1071-83-6 n-(phosphonomethyl)glycine #> 3: glyphosate 1071-83-6 n-(phosphonomethyl)glycine #> 4: glyphosate 1071-83-6 n-(phosphonomethyl)glycine #> 5: glyphosate 1071-83-6 n-(phosphonomethyl)glycine #> --- #> 242: glyphosate 1071-83-6 n-(phosphonomethyl)glycine #> 243: glyphosate 1071-83-6 n-(phosphonomethyl)glycine #> 244: glyphosate 1071-83-6 n-(phosphonomethyl)glycine #> 245: glyphosate 1071-83-6 n-(phosphonomethyl)glycine #> 246: glyphosate 1071-83-6 n-(phosphonomethyl)glycine #> inchikey #> 1: XDDAORKBJWWYJS-UHFFFAOYSA-N #> 2: XDDAORKBJWWYJS-UHFFFAOYSA-N #> 3: XDDAORKBJWWYJS-UHFFFAOYSA-N #> 4: XDDAORKBJWWYJS-UHFFFAOYSA-N #> 5: XDDAORKBJWWYJS-UHFFFAOYSA-N #> --- #> 242: XDDAORKBJWWYJS-UHFFFAOYSA-N #> 243: XDDAORKBJWWYJS-UHFFFAOYSA-N #> 244: XDDAORKBJWWYJS-UHFFFAOYSA-N #> 245: XDDAORKBJWWYJS-UHFFFAOYSA-N #> 246: XDDAORKBJWWYJS-UHFFFAOYSA-N #> inchi #> 1: 1S/C3H8NO5P/c5-3(6)1-4-2-10(7,8)9/h4H,1-2H2,(H,5,6)(H2,7,8,9) #> 2: 1S/C3H8NO5P/c5-3(6)1-4-2-10(7,8)9/h4H,1-2H2,(H,5,6)(H2,7,8,9) #> 3: 1S/C3H8NO5P/c5-3(6)1-4-2-10(7,8)9/h4H,1-2H2,(H,5,6)(H2,7,8,9) #> 4: 1S/C3H8NO5P/c5-3(6)1-4-2-10(7,8)9/h4H,1-2H2,(H,5,6)(H2,7,8,9) #> 5: 1S/C3H8NO5P/c5-3(6)1-4-2-10(7,8)9/h4H,1-2H2,(H,5,6)(H2,7,8,9) #> --- #> 242: 1S/C3H8NO5P/c5-3(6)1-4-2-10(7,8)9/h4H,1-2H2,(H,5,6)(H2,7,8,9) #> 243: 1S/C3H8NO5P/c5-3(6)1-4-2-10(7,8)9/h4H,1-2H2,(H,5,6)(H2,7,8,9) #> 244: 1S/C3H8NO5P/c5-3(6)1-4-2-10(7,8)9/h4H,1-2H2,(H,5,6)(H2,7,8,9) #> 245: 1S/C3H8NO5P/c5-3(6)1-4-2-10(7,8)9/h4H,1-2H2,(H,5,6)(H2,7,8,9) #> 246: 1S/C3H8NO5P/c5-3(6)1-4-2-10(7,8)9/h4H,1-2H2,(H,5,6)(H2,7,8,9) #> molecularweight result_id endpoint effect exposure trophic_lvl #> 1: 169.0731 2105550 XX50 mortality aquatic heterotroph #> 2: 169.0731 2101423 XX50 mortality aquatic heterotroph #> 3: 169.0731 2114879 XX50 mortality aquatic heterotroph #> 4: 169.0731 2115068 XX50 mortality aquatic heterotroph #> 5: 169.0731 2114880 XX50 mortality aquatic heterotroph #> --- #> 242: 169.0731 2470910 XX50 mortality aquatic heterotroph #> 243: 169.0731 2475114 XX50 mortality aquatic heterotroph #> 244: 169.0731 2480702 XX50 mortality environmental heterotroph #> 245: 169.0731 2489643 XX50 mortality aquatic heterotroph #> 246: 169.0731 2489605 XX50 mortality aquatic heterotroph #> ecotox_grp concentration_type concentration concentration_unit #> 1: fish not reported 67900 ppb #> 2: fish not reported 77600 ppb #> 3: fish active ingredient 134000 ppb #> 4: fish not reported 824000 ppb #> 5: fish active ingredient 240000 ppb #> --- #> 242: fish active ingredient 180000 ug/l #> 243: amphibia formulation 5380 ug/l #> 244: fungi formulation 250000 ppb #> 245: amphibia active ingredient 106000 ug/l #> 246: amphibia active ingredient 115000 ug/l #> concentration_orig concentration_unit_orig duration duration_unit outlier #> 1: 67.9 ppm 96 h FALSE #> 2: 77.6 ppm 96 h FALSE #> 3: 134 ppm 96 h FALSE #> 4: 824 ppm 96 h TRUE #> 5: 240 ppm 96 h FALSE #> --- #> 242: 180 mg/L 96 h FALSE #> 243: 5.38 mg/L 96 h FALSE #> 244: 0.025 % 48 h FALSE #> 245: 106 AI mg/L 96 h FALSE #> 246: 115 AI mg/L 96 h FALSE #> species_number tax_rank tax_taxon tax_genus #> 1: 1 species Pimephales promelas Pimephales #> 2: 4 species Oncorhynchus mykiss Oncorhynchus #> 3: 4 species Oncorhynchus mykiss Oncorhynchus #> 4: 4 species Oncorhynchus mykiss Oncorhynchus #> 5: 86 species Cyprinodon variegatus Cyprinodon #> --- #> 242: 28 species Poecilia reticulata Poecilia #> 243: 52467 species Physalaemus albonotatus Physalaemus #> 244: 17465 species Aspergillus nidulans Aspergillus #> 245: 52888 species Boana pardalis Boana #> 246: 51910 species Physalaemus cuvieri Physalaemus #> tax_family tax_order tax_class tax_superclass #> 1: Cyprinidae Cypriniformes Actinopterygii Osteichthyes #> 2: Salmonidae Salmoniformes Actinopterygii Osteichthyes #> 3: Salmonidae Salmoniformes Actinopterygii Osteichthyes #> 4: Salmonidae Salmoniformes Actinopterygii Osteichthyes #> 5: Cyprinodontidae Cyprinodontiformes Actinopterygii Osteichthyes #> --- #> 242: Poeciliidae Cyprinodontiformes Actinopterygii Osteichthyes #> 243: Leptodactylidae Anura Amphibia <NA> #> 244: Trichocomaceae Eurotiales Eurotiomycetes <NA> #> 245: Hylidae Anura Amphibia <NA> #> 246: Leptodactylidae Anura Amphibia <NA> #> tax_subphylum_div tax_phylum_division tax_kingdom hab_marine hab_brackish #> 1: Vertebrata Chordata Animalia NA NA #> 2: Vertebrata Chordata Animalia TRUE TRUE #> 3: Vertebrata Chordata Animalia TRUE TRUE #> 4: Vertebrata Chordata Animalia TRUE TRUE #> 5: Vertebrata Chordata Animalia TRUE TRUE #> --- #> 242: Vertebrata Chordata Animalia NA TRUE #> 243: Vertebrata Chordata Animalia NA NA #> 244: <NA> Ascomycota Fungi TRUE TRUE #> 245: Vertebrata Chordata Animalia NA NA #> 246: Vertebrata Chordata Animalia NA NA #> hab_freshwater hab_terrestrial reg_africa reg_america_north #> 1: TRUE NA NA TRUE #> 2: TRUE NA NA TRUE #> 3: TRUE NA NA TRUE #> 4: TRUE NA NA TRUE #> 5: TRUE NA NA TRUE #> --- #> 242: TRUE NA NA TRUE #> 243: NA NA NA NA #> 244: TRUE TRUE TRUE TRUE #> 245: NA NA NA NA #> 246: NA NA NA NA #> reg_america_south reg_asia reg_europe reg_oceania cro_endocrine_disruptor #> 1: NA NA TRUE NA TRUE #> 2: TRUE NA TRUE NA TRUE #> 3: TRUE NA TRUE NA TRUE #> 4: TRUE NA TRUE NA TRUE #> 5: NA NA NA NA TRUE #> --- #> 242: TRUE TRUE TRUE TRUE TRUE #> 243: TRUE NA NA NA TRUE #> 244: TRUE TRUE TRUE TRUE TRUE #> 245: TRUE NA NA NA TRUE #> 246: TRUE NA NA NA TRUE #> cro_herbicide cro_pesticide ccl_organophosphorus ref_number #> 1: TRUE TRUE TRUE 344 #> 2: TRUE TRUE TRUE 344 #> 3: TRUE TRUE TRUE 344 #> 4: TRUE TRUE TRUE 344 #> 5: TRUE TRUE TRUE 344 #> --- #> 242: TRUE TRUE TRUE 179273 #> 243: TRUE TRUE TRUE 179421 #> 244: TRUE TRUE TRUE 179826 #> 245: TRUE TRUE TRUE 180342 #> 246: TRUE TRUE TRUE 180342 #> ref_title #> 1: Pesticide Ecotoxicity Database (Formerly: Environmental Effects Database (EEDB)) #> 2: Pesticide Ecotoxicity Database (Formerly: Environmental Effects Database (EEDB)) #> 3: Pesticide Ecotoxicity Database (Formerly: Environmental Effects Database (EEDB)) #> 4: Pesticide Ecotoxicity Database (Formerly: Environmental Effects Database (EEDB)) #> 5: Pesticide Ecotoxicity Database (Formerly: Environmental Effects Database (EEDB)) #> --- #> 242: Gender-Specific Histopathological Response in Guppies Poecilia reticulata Exposed to Glyphosate or Its Metabolite Aminomethylphosphonic Acid #> 243: Toxicity of Glyphosate on Physalaemus albonotatus (Steindachner, 1864) from Western Brazil #> 244: Multiple Effects of a Commercial Roundup Formulation on the Soil Filamentous Fungus Aspergillus nidulans at Low Doses: Evidence of an Unexpected Impact on Energetic Metabolism #> 245: Lethal Toxicity of the Herbicides Acetochlor, Ametryn, Glyphosate and Metribuzin to Tropical Frog Larvae #> 246: Lethal Toxicity of the Herbicides Acetochlor, Ametryn, Glyphosate and Metribuzin to Tropical Frog Larvae #> ref_author #> 1: U.S. Environmental Protection Agency #> 2: U.S. Environmental Protection Agency #> 3: U.S. Environmental Protection Agency #> 4: U.S. Environmental Protection Agency #> 5: U.S. Environmental Protection Agency #> --- #> 242: Antunes,A.M., T.L. Rocha, F.S. Pires, M.A. De Freitas, V.R.M.C. Leite, S. Arana, P.C. Moreira, and S.M.T. Saboia-Morais #> 243: Simioni,F., D.F.N. Da Silva, and T. Mott #> 244: Nicolas,V., N. Oestreicher, and C. Velot #> 245: Daam,M.A., M.F. Moutinho, E.L.G. Espindola, and L. Schiesari #> 246: Daam,M.A., M.F. Moutinho, E.L.G. Espindola, and L. Schiesari #> ref_year #> 1: 1992 #> 2: 1992 #> 3: 1992 #> 4: 1992 #> 5: 1992 #> --- #> 242: 2017 #> 243: 2013 #> 244: 2016 #> 245: 2019 #> 246: 2019 #> #> $id #> cname cas inchikey #> 1: glyphosate 1071-83-6 XDDAORKBJWWYJS-UHFFFAOYSA-N #> 2: glyphosate 1071-83-6 XDDAORKBJWWYJS-UHFFFAOYSA-N #> 3: glyphosate 1071-83-6 XDDAORKBJWWYJS-UHFFFAOYSA-N #> 4: glyphosate 1071-83-6 XDDAORKBJWWYJS-UHFFFAOYSA-N #> 5: glyphosate 1071-83-6 XDDAORKBJWWYJS-UHFFFAOYSA-N #> --- #> 242: glyphosate 1071-83-6 XDDAORKBJWWYJS-UHFFFAOYSA-N #> 243: glyphosate 1071-83-6 XDDAORKBJWWYJS-UHFFFAOYSA-N #> 244: glyphosate 1071-83-6 XDDAORKBJWWYJS-UHFFFAOYSA-N #> 245: glyphosate 1071-83-6 XDDAORKBJWWYJS-UHFFFAOYSA-N #> 246: glyphosate 1071-83-6 XDDAORKBJWWYJS-UHFFFAOYSA-N #> inchi result_id #> 1: 1S/C3H8NO5P/c5-3(6)1-4-2-10(7,8)9/h4H,1-2H2,(H,5,6)(H2,7,8,9) 2105550 #> 2: 1S/C3H8NO5P/c5-3(6)1-4-2-10(7,8)9/h4H,1-2H2,(H,5,6)(H2,7,8,9) 2101423 #> 3: 1S/C3H8NO5P/c5-3(6)1-4-2-10(7,8)9/h4H,1-2H2,(H,5,6)(H2,7,8,9) 2114879 #> 4: 1S/C3H8NO5P/c5-3(6)1-4-2-10(7,8)9/h4H,1-2H2,(H,5,6)(H2,7,8,9) 2115068 #> 5: 1S/C3H8NO5P/c5-3(6)1-4-2-10(7,8)9/h4H,1-2H2,(H,5,6)(H2,7,8,9) 2114880 #> --- #> 242: 1S/C3H8NO5P/c5-3(6)1-4-2-10(7,8)9/h4H,1-2H2,(H,5,6)(H2,7,8,9) 2470910 #> 243: 1S/C3H8NO5P/c5-3(6)1-4-2-10(7,8)9/h4H,1-2H2,(H,5,6)(H2,7,8,9) 2475114 #> 244: 1S/C3H8NO5P/c5-3(6)1-4-2-10(7,8)9/h4H,1-2H2,(H,5,6)(H2,7,8,9) 2480702 #> 245: 1S/C3H8NO5P/c5-3(6)1-4-2-10(7,8)9/h4H,1-2H2,(H,5,6)(H2,7,8,9) 2489643 #> 246: 1S/C3H8NO5P/c5-3(6)1-4-2-10(7,8)9/h4H,1-2H2,(H,5,6)(H2,7,8,9) 2489605 #> species_number ref_number #> 1: 1 344 #> 2: 4 344 #> 3: 4 344 #> 4: 4 344 #> 5: 86 344 #> --- #> 242: 28 179273 #> 243: 52467 179421 #> 244: 17465 179826 #> 245: 52888 180342 #> 246: 51910 180342 #> #> $aggregated #> cname cas min tax_min gmn gmnsd max #> 1: glyphosate 1071-83-6 2.5145 Pheretima peguana 13614.71 2.399646 6209704 #> tax_max n #> 1: Carassius auratus 246 #> tax_all #> 1: Acartia tonsa, Americamysis bahia, Anabaena flosaquae, Aspergillus nidulans, Astacus leptodactylus, Boana pardalis, Carassius auratus, Ceriodaphnia dubia, Channa punctata, Chironomus plumosus, Chlorella pyrenoidosa, Chlorella saccharophila, Chlorella vulgaris, Chlorococcum hypnosporum, Chordodes nobilii, Clarias gariepinus, Crassostrea gigas, Crinia insignifera, Cyprinodon variegatus, Cyprinus carpio, Danio rerio, Daphnia magna, Daphnia spinulata, Dendrocephalus brasiliensis, Desmodesmus subspicatus, Eisenia fetida, Encyonema gracile, Euplotes vannus, Gambusia affinis, Gambusia yucatana, Gammarus pseudolimnaeus, Glyptocidaris crenularis, Gomphonema sp., Hoplobatrachus rugulosus, Hydra vulgaris, Ictalurus punctatus, Lactuca sativa, Lecane quadridentata, Lemna gibba, Lepomis macrochirus, Litoria moorei, Microcystis aeruginosa, Myriophyllum spicatum, Navicula pelliculosa, Oncorhynchus gorbuscha, Oncorhynchus keta, Oncorhynchus kisutch, Oncorhynchus mykiss, Oncorhynchus tshawytscha, Orconectes nais, Oreochromis niloticus, Pelophylax ridibundus, Perkinsus olseni, Pheretima peguana, Physalaemus albonotatus, Physalaemus cuvieri, Pimephales promelas, Plasmodium falciparum, Poecilia reticulata, Polypedates cruciger, Pomacea canaliculata, Pseudokirchneriella subcapitata, Salmo trutta, Scenedesmus acutus, Scenedesmus quadricauda, Skeletonema costatum, Xenopus laevis #> #> $meta #> variable value #> 1 accessed 2020-06-02 10:08:49 #> 2 standartox_version 20191212 #># }